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Imputation Analysis

Developed by GeneX

Extremely fast and highly accurate genotype imputation.

$9.99 per genome

Extremely Fast and Highly Accurate Genotype Imputation

This report can accurately impute millions of genetic variants. The report uses genotype data from a very large reference panel to infer (i.e., predict) genotype calls for:

  1. The ungenotyped variants (ie 'no calls') in your genetic data file.
  2. Variants in the reference panel that do not appear in your genetic data file.

 

The app provides a Confidence Score for each imputed genotype.

  • The Confidence Score can be found in the results.
  • You also have the option of setting a minimum Confidence Score when starting this app.
    • If you set a minimum Confidence Score, only imputed genotype at or above that Confidence Score threshold will appear in the results.

 

Important Note: This app can only process data aligned to the GRCh37/hg19 reference genome. It cannot process data aligned to GRCh38.