Advanced variant caller for exome and whole genome sequencing data including next-generation sequencing (NGS).
This app combines powerful cloud computing with SamTools for variant calling. It analyzes a BAM file and generates a VCF file that contains a list of identified variants including genotype calls and likelihoods.
This app is only compatible with BAM files obtained from genome sequencing. When this app is started, only BAM files (filenames that end with .bam) will be able to be selected.
$19 per use
You'll receive an email notification with a link to the app results, which will be a downloadable VCF file. The VCF file will be stored in your account and you can also use it with other apps.
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